FISH Probes by Chromosome

 

Test

Description

Test Code

CPT Codes

 

Chromosome 1

1q gain

Gain of 1q detection for myeloma

870F55

88271, 88271, 88275

Deletion 1p36 Syndrome

Deletion 1p36

871F27

88271, 88273, 88273

1p36/19q13 deletion

Deletion detection for glial neoplasia

886F5, 886F6

(88271, 88271, 88275 )x2

 

Chromosome 2

ALK gene rearrangement

2p23 [lung cancer]

882F87

88271, 88271, 88275

 

Chromosome 3

BCL6 gene rearrangement

3q27

882F88

88271, 88271, 88275

 

Chromosome 4

4 Centromere

Trisomy 4

870F48

88271, 88275

Wolf-Hirschhorn Syndrome, WHS

Deletion 4p16.3

871F33

88271, 88273

FGFR3/IGH fusion

t(4;14)(p16;q32)

881F69

88271, 88271, 88275

FIP1L1/CHIC2/PDGFRa gene rearr.

4q12

882F89

88271, 88271, 88271, 88275

 

Chromosome 5

5q31 (EGR1)

Deletion 5q / Monosomy 5

870F45

88271, 88271, 88275

Cri du Chat Syndrome D5S721/D5S23

Deletion 5p15.2

871F26

88271, 88273

PDGFRb gene rearrangement

5q33

882F90

88271, 88271, 88275

 

Chromosome 6

 

Chromosome 7

7q31 (D7S522)

Deletion 7q / Monosomy 7

870F42

88271, 88271, 88275

 

Chromosome 8

8 Centromere

Trisomy 8

870F41

88271, 88275

RUNX1T1/RUNX1 (ETO/AML1) fusion

t(8;21)(q22;q22)

881F63

88271, 88271, 88275

MYC/IGH fusion

t(8;14)(q24;q32)

881F65

88271, 88271, 88275

MYC gene rearrangement

8q24

882F85

88271, 88271, 88275

FGFR1 gene rearrangement

8p11

882F93

88271, 88271, 88275

 

Chromosome 9

9p21 (P16)

Deletion 9p

870F46

88271, 88275

BCR/ABL1 fusion

t(9;22)(q34;q11.2)

881F61

88271, 88271, 88275

BCR/ABL1/ASS fusion

t(9;22)(q34;q11.2)/ASS deletion

881F71

88271, 88271, 88271, 88275

 

Chromosome 10

10 Centromere

Trisomy 10

870F49

88271, 88275

 

Chromosome 11

ATM (11q22)

Deletion/duplication of ATM

870F40

88271, 88275

API1/MALT1 fusion

t(11;18)(q21;q21)

881F60

88271, 88271, 88275

CCND1/IGH fusion

t(11;14)(q13;q32)

881F62

88271, 88271, 88275

KMT2A (MLL) gene rearrangement

11q23

882F84

88271, 88271, 88275

 

Chromosome 12

12 Centromere

Trisomy 12

870F51

88271, 88275

ETV6/RUNX1 (TEL/AML1) fusion

t(12;21)(p13;q22)

881F67

88271, 88271, 88275

DDIT3 (CHOP) gene rearrangement

12q13

882F94

88271, 88271, 88275

 

Chromosome 13

Prenatal Aneuploidy Panel, Amniotic fluid

13q, 18cen, 21q, Xcen, Ycen

873

88271×5, 88275

Stillbirth Aneuploidy Panel, Paraffin embedded

13q, 18cen, 21q, Xcen, Ycen

875

88271×5, 88275

13q14 (D13S319)

Deletion 13q / Monosomy 13

870F43

88271, 88271, 88275

 

Chromosome 14

CCND1/IGH fusion

t(11;14)(q13;q32)

881F62

88271, 88271, 88275

IGH/BCL2 fusion

t(14;18)(q32;q21)

881F64

88271, 88271, 88275

MYC/IGH fusion

t(8;14)(q24;q32)

881F65

88271, 88271, 88275

IGH/MALT1 fusion

t(14;18)(q32;q21)

881F68

88271, 88271, 88275

FGFR3/IGH fusion

t(4;14)(p16;q32)

881F69

88271, 88271, 88275

IGH/MAF fusion

t(14;16)(q32;q23)

881F70

88271, 88271, 88275

IGH/MAFB fusion

t(14;20)(q32;q12)

881F72

88271, 88271, 88275

IGH gene rearrangement

14q32

882F82

88271, 88271, 88275

TRA/D (T-cell receptor alpha/delta) gene rearr.

14q11.2

882F91

88271, 88271, 88275

 

Chromosome 15

Angelman Syndrome, D15S10/UBE3A

Deletion 15q11.2

871F25

88271, 88273

Prader-Willi Syndrome, SNRPN

Deletion 15q11.2

871F30

88271, 88273

PML/RARA fusion

t(15;17)(q24;q21)

881F66

88271, 88271, 88275

 

Chromosome 16

IGH/MAF fusion

t(14;16)(q32;q23)

881F70

88271, 88271, 88275

CBFB gene rearrangement

16q22 [inversion 16]

882F80

88271, 88271, 88275

FUS gene rearrangement

16p11

882F95

88271, 88271, 88275

 

Chromosome 17

ERBB2 (HER2)

ERBB2 gene amplification status

883

83950

17p13.1 (TP53)

Deletion 17p

870F47

88271, 88275

17 Centromere

Trisomy 17

870F50

88271, 88275

PML/RARA fusion

t(15;17)(q24;q21)

881F66

88271, 88271, 88275

RARA gene rearrangement

17q21

882F92

88271, 88271, 88275

 

Chromosome 18

Prenatal Aneuploidy Panel, Amniotic fluid

13q, 18cen, 21q, Xcen, Ycen

873

88271×5, 88275

Stillbirth Aneuploidy Panel, Paraffin embedded

13q, 18cen, 21q, Xcen, Ycen

875

88271×5, 88275

API1/MALT1 fusion

t(11;18)(q21;q21)

881F60

88271, 88271, 88275

IGH/BCL2 fusion

t(14;18)(q32;q21)

881F64

88271, 88271, 88275

IGH/MALT1 fusion

t(14;18)(q32;q21)

881F68

88271, 88271, 88275

MALT1 gene rearrangement

18q21 [MALT lymphoma]

882F83

88271, 88271, 88275

SS18 gene rearrangement

18q11.2 [Synovial sarcoma]

882F86

88271, 88271, 88275

 

Chromosome 19

1p36/19q13 deletion

Deletion detection for glial neoplasia

886F5, 886F6

(88271, 88271, 88275 )x2

 

Chromosome 20

20q12 (D20S108)

Deletion 20q

870F44

88271, 88275

IGH/MAFB fusion

t(14;20)(q32;q12)

881F72

88271, 88271, 88275

 

Chromosome 21

Prenatal Aneuploidy Panel, Amniotic fluid

13q, 18cen, 21q, Xcen, Ycen

873

88271×5, 88275

Stillbirth Aneuploidy Panel, Paraffin embedded

13q, 18cen, 21q, Xcen, Ycen

875

88271×5, 88275

RUNX1T1/RUNX1 (ETO/AML1) fusion

t(8;21)(q22;q22)

881F63

88271, 88271, 88275

ETV6/RUNX1 (TEL/AML1) fusion

t(12;21)(p13;q22)

881F67

88271, 88271, 88275

 

Chromosome 22

DiGeorge/VCF/Schpritzen Conotruncal Anomaly Syndrome, TUPLE1

Deletion 22q11.2

871F28

88271, 88273

BCR/ABL1 fusion

t(9;22)(q34;q11.2)

881F61

88271, 88271, 88275

BCR/ABL1/ASS fusion

t(9;22)(q34;q11.2)/ASS deletion

881F71

88271, 88271, 88271, 88275

EWSR1 gene rearrangement

22q12.2 [Ewing’s sarcoma]

882F81

88271, 88271, 88275

 

Chromosome X

Prenatal Aneuploidy Panel, Amniotic fluid

13q, 18cen, 21q, Xcen, Ycen

873

88271×5, 88275

Stillbirth Aneuploidy Panel, Paraffin embedded

13q, 18cen, 21q, Xcen, Ycen

875

88271×5, 88275

X, Y Centromeres

Sex chromosomes

870F52

88271, 88271, 88275

 

Chromosome Y

Prenatal Aneuploidy Panel, Amniotic fluid

13q, 18cen, 21q, Xcen, Ycen

873

88271×5, 88275

Stillbirth Aneuploidy Panel, Paraffin embedded

13q, 18cen, 21q, Xcen, Ycen

875

88271×5, 88275

X, Y Centromeres

Sex chromosomes

870F52

88271, 88271, 88275

SRY, (Sex Determiing Region of Y)

Deletion Yp11.3

871F34

88271, 88273

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